Microsoft word - illumina sequence information for customers dec2008.doc

Dear Customer, This communication is in response to your request for particular oligonucleotide sequences for use with the Illumina Genome Analyzer and associated assays. Below please find the oligonucleotide sequences that we can make available to you. This communication is solely for your use and should not be distributed outside your institution. The oligonucleotide sequences are protected by copyright which is owned by Illumina. Illumina allows you to reproduce the oligonucleotide sequences for use with the Illumina Genome Analyzer and associated assays. Additionally, Illumina realizes customers may need to make alterations to the oligonucleotide sequences that are necessary to allow use with the Illumina Genome Analyzer and associated assays. Thus, Illumina allows you to make such necessary alterations to the oligonucleotide sequences but only for use with the Illumina Genome Analyzer and associated assays. Illumina grants you no other rights to use, reproduce or otherwise disclose the oligonucleotide sequences. Alteration or modification of the oligonucleotide sequences for use with non-Illumina products is not allowed. If you reproduce the oligonucleotide sequences for viewing within your institution, the following copyright notice must remain affixed to the sequences: Oligonucleotide sequences 2006-2008 Illumina, Inc. All rights reserved. Illumina customers may reproduce and create derivative works of the oligonucleotide sequences but only for use with the Illumina Genome Analyzer and associated assays. All other uses are strictly prohibited. If you reproduce these oligonucleotide sequences for viewing outside your institution (e.g. journal publication), you must affix the following copyright notice to the sequences: Oligonucleotide sequences 2006-2008 Illumina, Inc. All rights reserved.
Genomic DNA oligonucleotide sequences
Adapters1

PCR Primers1
5' AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT Genomic DNA Sequencing Primer
5' ACACTCTTTCCCTACACGACGCTCTTCCGATCT
1 The genomic DNA adapters and PCR primers are additionally modified, treated and purified in a proprietary manner. We cannot guarantee efficient cluster generation or sequencing if customer does not use adapters and PCR primers purchased from Illumina in the genomic DNA sample prep kit.
Multiplexing DNA oligonucleotide sequences
Multiplexing Adapters1

Multiplexing PCR Primer 1.01
5' AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT Multiplexing PCR Primer 2.01
5' GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT
Multiplexing Read 1 Sequencing Primer
5' ACACTCTTTCCCTACACGACGCTCTTCCGATCT
Multiplexing Index Read Sequencing Primer
5' GATCGGAAGAGCACACGTCTGAACTCCAGTCAC
Multiplexing Read 2 Sequencing Primer
5' GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT
PCR Primer Index 1
CAAGCAGAAGACGGCATACGAGATCGTGATGTGACTGGAGTTC
PCR Primer Index 2
CAAGCAGAAGACGGCATACGAGATACATCGGTGACTGGAGTTC
PCR Primer Index 3
CAAGCAGAAGACGGCATACGAGATGCCTAAGTGACTGGAGTTC
PCR Primer Index 4
CAAGCAGAAGACGGCATACGAGATTGGTCAGTGACTGGAGTTC
PCR Primer Index 5
CAAGCAGAAGACGGCATACGAGATCACTGTGTGACTGGAGTTC
PCR Primer Index 6
CAAGCAGAAGACGGCATACGAGATATTGGCGTGACTGGAGTTC
PCR Primer Index 7
CAAGCAGAAGACGGCATACGAGATGATCTGGTGACTGGAGTTC
PCR Primer Index 8
CAAGCAGAAGACGGCATACGAGATTCAAGTGTGACTGGAGTTC
PCR Primer Index 9
CAAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTC
PCR Primer Index 10
CAAGCAGAAGACGGCATACGAGATAAGCTAGTGACTGGAGTTC
PCR Primer Index 11
CAAGCAGAAGACGGCATACGAGATGTAGCCGTGACTGGAGTTC
PCR Primer Index 12
CAAGCAGAAGACGGCATACGAGATTACAAGGTGACTGGAGTTC

Paired End DNA oligonucleotide sequences
PE Adapters1
5' P-GATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
PE PCR Primer 1.01
5' AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
PE PCR Primer 2.01
5' CAAGCAGAAGACGGCATACGAGATCGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT
PE Read 1 Sequencing Primer
PE Read 2 Sequencing Primer
5' CGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT

DpnII gene expression oligonucleotide sequences
Gex Adapter 1
5' P-GATCGTCGGACTGTAGAACTCTGAAC
Gex Adapter 2
Gex PCR Primer 1
5' CAAGCAGAAGACGGCATACGA
Gex PCR Primer 2
5' AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
Gex Sequencing Primer

NlaIII gene expression oligonucleotide sequences
Gex Adapter 1

Gex Adapter 2
Gex PCR Primer 1
5' CAAGCAGAAGACGGCATACGA
Gex PCR Primer 2
5' AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
Gex Sequencing Primer

Small RNA oligonucleotide sequences
RT Primer

5' RNA Adapter
3' RNA Adapter
Small RNA PCR Primer 1
5' CAAGCAGAAGACGGCATACGA
Small RNA PCR Primer 2
5' AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
Small RNA Sequencing Primer
Please contact us if you have any questions. Sincerely, Customer Support - Illumina Inc. 858-202-4566

Source: http://genecore3.genecore.embl.de/genecore3/downloads/Solexa/Solexa%20linkers-primers%20Sequence%20Information-Dec2008.pdf

Microsoft word - pap available_products may 2013_0513-00015580-1_5-21-13.doc

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Microsoft word - sample c & p report

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